About Us
We are a research group focused on different aspects of neuroimaging, from microscopy to magnetic resonance imaging. As the name says we are not limited to neuroimaging but involved also in other medical imaging projects as well as translation of research into startups and other forms of inclusion in our society.
Brain&More meetup
We are starting our outreach activities with AGH students through our meetup
NeuroSummerSchool
We are organizing the first summer school in Lipari (Italy) about neuroimaging, neurooncology and neuroscience
MICCAI Brainlesion workshop
For the 5th time we are organizing the MICCAI workpshop on brainlesion also including the BRATS challenge
Our Portfolio
In this section we list our publications as well as other projects
Selection Peer-reviewed journals
Functional and structural reorganization in brain tumors: a machine learning approach using desynchronized functional oscillations Joan Falcó-Roget, Alberto Cacciola, Fabio Sambataro & Alessandro Crimi Nature Communication Biology, 7, Article number: 419 (2024)
Deep Learning Glioma Grading with the Tumor Microenvironment Analysis Protocol for Comprehensive Learning, Monika Pytlarz, Kamil Wojnicki, Paulina Pilanc, Bozena Kaminska, Alessandro Crimi, Journal of Imaging Informatics in Medicine, 1-17
Prediction of misfolded proteins spreading in Alzheimer’s disease using machine learning and spreading models Luca Gherardini, Aleksandra Zajdel, Lorenzo Pini, Alessandro Crimi Cerebral Cortex 2023, bhad380
Structurally Constrained Effective Brain Connectivity A Crimi, L Dodero, F Sambataro, V Murino, D Sona NeuroImage 239 (1), 118288
An integrated genomic approach to dissect the genetic landscape regulating the cell-to-cell transfer of α-synuclein E Kara, A Crimi, A Wiedmer, M Emmenegger, C Manzoni, S Bandres-Ciga, ... Cell Reports 35 (10), 109189 2021
Community detection in brain connectomes with hybrid quantum computing M. Wierzbiński, J. Falcó-Roget & A. Crimi Nature Scientific Reports 2023
Genome-wide association study of brain connectivity changes for alzheimer’s disease SSM Elsheikh, ER Chimusa, NJ Mulder, A Crimi Nature Scientific reports 10 (1), 1-16
Relating Global and Local Connectome Changes to Dementia and Targeted Gene Expression in Alzheimer's Disease SSM Elsheikh, ER Chimusa, NJ Mulder, A Crimi Frontiers in Human Neuroscience December 2021
Automated glioma multiclass tumor classification Pytlarz, M., Wojnicki, K., Pilanc, P., Kaminska, B., & Crimi, A. In Medical Imaging 2023: Digital and Computational Pathology (Vol. 12471, pp. 395-401). SPIE.
Software
BrainSpreadStartups
SNeuronEye (in foundation phase)People
Current members
Dr. Alessandro Crimi
Research Group leaderDr. Adrian Onicas
Post-doctoral researcherDr. Cemal Koba
Post-doctoral researcherSylwia Malec
PhD studentSzymon Mazurek
Master studentJoan Falco Roget
PhD studentMonika Pytlarz
PhD studentLola
Visiting professorRosmary Blanco
PhD studentAgus Hartoyo
Post-doctoral researcherWojciech Ciezobka
Master studentAlumni
Aleksandra Pestka
Master studentMarcin Wierzbiński
Scientific software engineerFelix Akwasi Sarpong
Master studentTeam composition and role
Dr. Alessandro Crimi
is the head of the research unit.
Sylwia Malec
is working on deep learning based registration and multimodal image analysis of COVID19/Asthma infections
Aleksandra Pestka
is working on validating models of misfolded protein spreading on brain structural data as connectome.
Marcin Wierzbiński
is working on protein and drug design optimized on quantum devices.
Joan Falco Roget
is working on plasticity quantification on glioma and stroke patients.
Monika Pytlarz
is working on microscopy image analysis and generative adversial networks.
Lola
is our expert in psychological support.
Felix Akwasi Sarpong
is working on causal models and reservoir neural networks.
Teaching
Courses taught either in person or online.
Contact Us
Feel free to contact us to apply for positions or establish synergetic collaborations!
Check positions on the main Sano webiste
or through programs we are used to:
Our Address
Sano, center for computational medicine
Czarnowiejska 36 building C5
30-054 Kraków, Poland
Email Us
info@sanoscience.org
Call Us
+48 123072737