info@sanoscience.org +48 123072737

About Us

We are a research group focused on different aspects of neuroimaging, from microscopy to magnetic resonance imaging. As the name says we are not limited to neuroimaging but involved also in other medical imaging projects as well as translation of research into startups and other forms of inclusion in our society.

SanoScience

We are part of Sano, center of computational medicine

AGH Krakow

and located inside the AGH campus

News
3/10/2021

Brain&More meetup

We are starting our outreach activities with AGH students through our meetup

15/5/2023

NeuroSummerSchool

We are organizing the first summer school in Lipari (Italy) about neuroimaging, neurooncology and neuroscience

26/5/2023

MICCAI Brainlesion workshop

For the 5th time we are organizing the MICCAI workpshop on brainlesion also including the BRATS challenge

Our Portfolio

In this section we list our publications as well as other projects

Selection Peer-reviewed journals

Functional and structural reorganization in brain tumors: a machine learning approach using desynchronized functional oscillations Joan Falcó-Roget, Alberto Cacciola, Fabio Sambataro & Alessandro Crimi Nature Communication Biology, 7, Article number: 419 (2024)

Deep Learning Glioma Grading with the Tumor Microenvironment Analysis Protocol for Comprehensive Learning, Monika Pytlarz, Kamil Wojnicki, Paulina Pilanc, Bozena Kaminska, Alessandro Crimi, Journal of Imaging Informatics in Medicine, 1-17

Prediction of misfolded proteins spreading in Alzheimer’s disease using machine learning and spreading models Luca Gherardini, Aleksandra Zajdel, Lorenzo Pini, Alessandro Crimi Cerebral Cortex 2023, bhad380

Structurally Constrained Effective Brain Connectivity A Crimi, L Dodero, F Sambataro, V Murino, D Sona NeuroImage 239 (1), 118288

An integrated genomic approach to dissect the genetic landscape regulating the cell-to-cell transfer of α-synuclein E Kara, A Crimi, A Wiedmer, M Emmenegger, C Manzoni, S Bandres-Ciga, ... Cell Reports 35 (10), 109189 2021

Community detection in brain connectomes with hybrid quantum computing M. Wierzbiński, J. Falcó-Roget & A. Crimi Nature Scientific Reports 2023

Genome-wide association study of brain connectivity changes for alzheimer’s disease SSM Elsheikh, ER Chimusa, NJ Mulder, A Crimi Nature Scientific reports 10 (1), 1-16

Relating Global and Local Connectome Changes to Dementia and Targeted Gene Expression in Alzheimer's Disease SSM Elsheikh, ER Chimusa, NJ Mulder, A Crimi Frontiers in Human Neuroscience December 2021

Automated glioma multiclass tumor classification Pytlarz, M., Wojnicki, K., Pilanc, P., Kaminska, B., & Crimi, A. In Medical Imaging 2023: Digital and Computational Pathology (Vol. 12471, pp. 395-401). SPIE.

   

Software

BrainSpread

Startups

SNeuronEye (in foundation phase)

People

Current members

Dr. Alessandro Crimi

Research Group leader

Dr. Adrian Onicas

Post-doctoral researcher

Dr. Cemal Koba

Post-doctoral researcher

Sylwia Malec

PhD student

Szymon Mazurek

Master student

Joan Falco Roget

PhD student

Monika Pytlarz

PhD student

Lola

Visiting professor

Rosmary Blanco

PhD student

Agus Hartoyo

Post-doctoral researcher

Wojciech Ciezobka

Master student

Alumni

Aleksandra Pestka

Master student

Marcin Wierzbiński

Scientific software engineer

Felix Akwasi Sarpong

Master student

Team composition and role

Dr. Alessandro Crimi

is the head of the research unit.

Sylwia Malec

is working on deep learning based registration and multimodal image analysis of COVID19/Asthma infections

Aleksandra Pestka

is working on validating models of misfolded protein spreading on brain structural data as connectome.

Marcin Wierzbiński

is working on protein and drug design optimized on quantum devices.

Joan Falco Roget

is working on plasticity quantification on glioma and stroke patients.

Monika Pytlarz

is working on microscopy image analysis and generative adversial networks.

Lola

is our expert in psychological support.

Felix Akwasi Sarpong

is working on causal models and reservoir neural networks.

Contact Us

Feel free to contact us to apply for positions or establish synergetic collaborations!


Check positions on the main Sano webiste
or through programs we are used to:
                       

Our Address

Sano, center for computational medicine
Czarnowiejska 36 building C5 30-054 Kraków, Poland

15-20 minutes far from Krakow main station

Email Us

info@sanoscience.org

Call Us

+48 123072737